Search results for "Genetic Speciation"

showing 10 items of 40 documents

Genomics of speciation and introgression in Princess cichlid fishes from Lake Tanganyika.

2016

How variation in the genome translates into biological diversity and new species originate has endured as the mystery of mysteries in evolutionary biology. African cichlid fishes are prime model systems to address speciation-related questions for their remarkable taxonomic and phenotypic diversity, and the possible role of gene flow in this process. Here, we capitalize on genome sequencing and phylogenomic analyses to address the relative impacts of incomplete lineage sorting, introgression and hybrid speciation in the Neolamprologus savoryi-complex (the 'Princess cichlids') from Lake Tanganyika. We present a time-calibrated species tree based on whole-genome sequences and provide strong ev…

0301 basic medicineGenetic SpeciationIntrogressionGenomicsBiologyTanzaniaNucleotide diversityCoalescent theory03 medical and health sciencesCichlidGeneticsAnimalsEcology Evolution Behavior and SystematicsGeneticsGenomeCichlidsGenomicsbiology.organism_classificationLakes030104 developmental biologyGenetic SpeciationPhenotypeEvolutionary biologyHybrid speciationNeolamprologushuman activitiesMolecular ecology
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Adaptive radiation along a thermal gradient: preliminary results of habitat use and respiration rate divergence among whitefish morphs.

2014

Adaptive radiation is considered an important mechanism for the development of new species, but very little is known about the role of thermal adaptation during this process. Such adaptation should be especially important in poikilothermic animals that are often subjected to pronounced seasonal temperature variation that directly affects metabolic function. We conducted a preliminary study of individual lifetime thermal habitat use and respiration rates of four whitefish (Coregonus lavaretus (L.)) morphs (two pelagic, one littoral and one profundal) using stable carbon and oxygen isotope values of otolith carbonate. These morphs, two of which utilized pelagic habitats, one littoral and one …

SympatryGenetic SpeciationEvolutionary PhysiologyEcophysiologyNicheeducationlcsh:MedicineBiologyFRACTIONATION EQUATIONFRESH-WATER FISHEcological speciationRespiratory RateAdaptive radiationAnimalsProfundal zone14. Life underwaterTROUT SALMO-TRUTTAlcsh:ScienceEcosystemEcological nicheFreshwater EcologySYMPATRIC WHITEFISHEvolutionary BiologyMultidisciplinarySALVELINUS-ALPINUS L.EUROPEAN WHITEFISHSUB-ARCTIC LAKEECOLOGICAL SPECIATIONEcologyEcologylcsh:RAge FactorsTemperatureNiche segregationBiology and Life SciencesPelagic zoneCOREGONUS-LAVARETUS L.Adaptation PhysiologicalLakesSympatryEvolutionary Ecology1181 Ecology evolutionary biologyta1181DELTA-C-13 VALUESlcsh:QSalmonidaeResearch ArticlePloS one
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Long-Distance Travellers: Phylogeography of a Generalist Parasite, Pholeter gastrophilus, from Cetaceans

2017

We studied the phylogeography and historical demography of the most generalist digenean from cetaceans, Pholeter gastrophilus, exploring the effects of isolation by distance, ecological barriers and hosts' dispersal ability on the population structure of this parasite. The ITS2 rDNA, and the mitochondrial COI and ND1 from 68 individual parasites were analysed. Worms were collected from seven oceanic and coastal cetacean species from the south western Atlantic (SWA), central eastern Atlantic, north eastern Atlantic (NEA), and Mediterranean Sea. Pholeter gastrophilus was considered a single lineage because reciprocal monophyly was not detected in the ML cladogram of all individuals, and seque…

0106 biological sciences0301 basic medicineHeredityTroglotrematidaePopulation Dynamicslcsh:MedicinePopulation geneticsMarine and Aquatic SciencesPathogenesisGeneralist and specialist speciesPathology and Laboratory Medicine01 natural sciencesMonophylyDatabase and Informatics MethodsOceansMedicine and Health Scienceslcsh:ScienceAtlantic OceanMammalseducation.field_of_studyLikelihood FunctionsMultidisciplinaryGeographyReproductive isolationDNA HelminthPhylogeographyGenetic MappingBiogeographyVertebratesHost-Pathogen InteractionsSequence AnalysisResearch ArticleReproductive IsolationBioinformaticsGenetic SpeciationDolphinsPopulationZoologyMarine BiologyBiologyResearch and Analysis Methods010603 evolutionary biology03 medical and health sciencesBodies of waterGeneticsMediterranean SeaAnimalseducationMarine MammalsIsolation by distanceDemographyEvolutionary BiologyAnalysis of VariancePopulation BiologyPilot Whaleslcsh:REcology and Environmental SciencesOrganismsWhalesBiology and Life SciencesGenetic VariationSequence Analysis DNAPhylogeography030104 developmental biologyHaplotypesAmniotesEarth SciencesBiological dispersallcsh:QCetaceaPopulation GeneticsPLoS ONE
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The role of geographic setting on the diversification process among Tephritis conura (Tephritidae) host races

2006

We address the controversy over the processes causing divergence during speciation. Host races of the fruit fly Tephritis conura attack the thistles Cirsium oleraceum and Cirsium heterophyllum. By studying the genetic divergence of T. conura in areas where host plants are sympatric, parapatric and allopatric, we assessed the contribution of geography in driving host-race divergence. We also evaluated the relative importance of genetic drift and selection in the diversification process, by analysis of the geographic distribution of genetic variation. Host races were significantly diverged at five out of 13 polymorphic allozyme loci. Variance at two loci, Hex and Pep D, was almost exclusively…

SympatryPolymorphism GeneticGeographybiologyGenetic SpeciationTephritidaeAllopatric speciationCirsium oleraceumParapatric speciationbiology.organism_classificationGenetic divergenceTephritis conuraGene FrequencySympatric speciationEvolutionary biologyGeneticsAnimalsCirsium heterophyllumGenetics (clinical)Heredity
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A molecular phylogeny for the leaf-roller moths (Lepidoptera: Tortricidae) and its implications for classification and life history evolution.

2012

BackgroundTortricidae, one of the largest families of microlepidopterans, comprise about 10,000 described species worldwide, including important pests, biological control agents and experimental models. Understanding of tortricid phylogeny, the basis for a predictive classification, is currently provisional. We present the first detailed molecular estimate of relationships across the tribes and subfamilies of Tortricidae, assess its concordance with previous morphological evidence, and re-examine postulated evolutionary trends in host plant use and biogeography.Methodology/principal findingsWe sequenced up to five nuclear genes (6,633 bp) in each of 52 tortricids spanning all three subfamil…

0106 biological sciencesTortricidaeGenetic SpeciationScienceZoologyChlidanotinaeGenes InsectMothsAnimal Phylogenetics010603 evolutionary biology01 natural sciencesEvolution MolecularMonophylyPhylogeneticsAnimalsEvolutionary SystematicsOlethreutinaeBiologyPhylogenyLikelihood FunctionsEvolutionary BiologyMultidisciplinarybiologyPhylogenetic treeEcologyQRComputational BiologyAgricultureBiodiversityAutecologybiology.organism_classificationPhylogenetics010602 entomologyBiogeographyEvolutionary biologyAnimal TaxonomyMolecular phylogeneticsMedicinePest ControlSequence AnalysisZoologyEntomologyTortricinaeMultilocus Sequence TypingResearch ArticlePloS one
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Adaptation and ecological speciation in seasonally varying environments at high latitudes: Drosophila virilis group

2022

Living in high latitudes and altitudes sets specific requirements on species’ ability to forecast seasonal changes and to respond to them in an appropriate way. Adaptation into diverse environmental conditions can also lead to ecological speciation through habitat isolation or by inducing changes in traits that influence assortative mating. In this review, we explain how the unique time-measuring systems of Drosophila virilis group species have enabled the species to occupy high latitudes and how the traits involved in species reproduction and survival exhibit strong linkage with latitudinally varying photoperiodic and climatic conditions. We also describe variation in reproductive barriers…

Drosophila virilis groupReproductive IsolationmahlakärpäsetGenetic SpeciationLocal adaptationPhotoperiodreproductive diapauseReviewkylmänkestävyysphotoperiodic timerchromosomal inversionscircadian clockilmastoelinympäristöAnimalsmuuntelu (biologia)lepotilavuorokausirytmisopeutuminenvuodenajatkromosomi-inversiotReproductioncold tolerancelisääntyminenAdaptation Physiologicalgenome sequencingInsect SciencelajiutuminenDrosophilacandidate genesreproductive barrierslocal adaptationFly
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Phylogenetics of Anthyllis (Leguminosae: Papilionoideae: Loteae): Partial incongruence between nuclear and plastid markers, a long branch problem and…

2010

Abstract Phylogenetic relationships in the genus Anthyllis (Leguminosae: Papilionoideae: Loteae) were investigated using data from the nuclear ribosomal internal transcribed spacer regions (ITS) and three plastid regions (psbA–trnH intergenic spacer, petB–petD region and rps16 intron). Bayesian and maximum parsimony (MP) analysis of a concatenated plastid dataset recovered well-resolved trees that are topologically similar, with many clades supported by unique indels. MP and Bayesian analyses of the ITS sequence data recovered trees that have several well-supported topological differences, both among analyses, and to trees inferred from the plastid data. The most substantial of these concer…

Genetic SpeciationMolecular Sequence DataAnthyllisMonophylyBotanyDNA Ribosomal SpacerGeneticsPlastidsInternal transcribed spacerMolecular BiologyEcology Evolution Behavior and SystematicsPhylogenyCell NucleusLikelihood FunctionsbiologyPhylogenetic treeBase SequenceModels GeneticDNA ChloroplastBayes TheoremFabaceaeSequence Analysis DNAbiology.organism_classificationBiological EvolutionReticulate evolutionIntronsMaximum parsimonyLoteaeMolecular phylogeneticsPollenSequence AlignmentMolecular phylogenetics and evolution
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Gene Regulation and Species-Specific Evolution of Free Flight Odor Tracking in Drosophila

2018

Running title: flight evolution in Drosophila This is an invited contribution to the special issue on Genetics of Adaptation based on a symposium of the same name at the National Centre for Biological Sciences (TIFR, Bangalore, India) in November 2016; International audience; The flying ability of insects has coevolved with the development of organs necessary to take-off from the ground, generate, and modulate lift during flight in complex environments. Flight orientation to the appropriate food source and mating partner depends on the perception and integration of multiple chemical signals. We used a wind tunnel-based assay to investigate the natural and molecular evolution of free flight …

Fatty Acid DesaturasesMale0301 basic medicineFat bodymelanogastercoordinationD. buzzatiiconsequencesReceptors OdorantPheromonesD. suzukiifliesDrosophila ProteinsGene Regulatory Networksfat bodyMatingRegulation of gene expressionbiologysex-pheromonesAnatomyBiological EvolutionoenocytemodulationDrosophilaFemaleFree flightZimbabweGenetic SpeciationsystemD. virilisEvolution Molecular03 medical and health sciencesSex FactorsSpecies Specificitydesaturase geneMolecular evolutiondesat1expressionGeneticsAnimalsMolecular BiologyDrosophilaGeneEcology Evolution Behavior and Systematics[SDV.GEN]Life Sciences [q-bio]/Geneticsfungibiology.organism_classification030104 developmental biologyGene Expression RegulationOdorEvolutionary biologyFlight Animalsexual dimorphismOdorants[ SDV.GEN ] Life Sciences [q-bio]/Genetics
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Niche filling slows the diversification of Himalayan songbirds.

2013

In Himalayan songbirds, the speciation rate is ultimately set by ecological competition, rather than by the rate of acquisition of reproductive isolation. The beginnings of adaptive radiation and speciation have been widely studied — in Darwin's finches, sticklebacks and cichlid fish, for example — but relatively little is known about what happens next. Specifically, what is the rate-limiting step for the establishment of new species? This seven-year study of the 358 songbird species found on the Himalayan slopes suggests that it is the rates at which new niches are created and occupied that limits diversification, not the rate at which new species form through reproductive isolation. Speci…

Ecological nicheChinaMultidisciplinaryEcologyRange (biology)Genetic Speciationmedia_common.quotation_subjectAltitudeReproductionIndiaReproductive isolationBiologyTibetCompetition (biology)Ecological speciationSongbirdsAdaptive radiationGenetic algorithmCharacter displacementAnimalsBody SizeEcosystemPhylogenymedia_commonNature
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Past climate changes facilitated homoploid speciation in three mountain spiny fescues (Festuca, Poaceae)

2016

Apart from the overwhelming cases of allopolyploidization, the impact of speciation through homoploid hybridization is becoming more relevant than previously thought. Much less is known, however, about the impact of climate changes as a driven factor of speciation. To investigate these issues, we selected Festuca picoeuropeana, an hypothetical natural hybrid between the diploid species F. eskia and F. gautieri that occurs in two different mountain ranges (Cantabrian Mountains and Pyrenees) separated by more than 400 km. To unravel the outcomes of this mode of speciation and the impact of climate during speciation we used a multidisciplinary approach combining genome size and chromosome coun…

Festuca0106 biological sciences0301 basic medicineReproductive IsolationFestucaGenetic SpeciationClimate ChangeNicheIntrogressionBiology010603 evolutionary biology01 natural sciencesArticlePolyploidy03 medical and health sciencesSpecies SpecificityGenetic algorithmPhylogenyHybridEcological nichePloidiesMultidisciplinaryGeographyGenetic VariationReproductive isolation15. Life on landbiology.organism_classificationDiploidy030104 developmental biologyGenetic SpeciationSpain13. Climate actionEvolutionary biologyHybridization GeneticGenome PlantScientific Reports
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